Annotated reference transcriptome for female Culicoides sonorensis biting midges

Unigene sequences were annotated by BlastX alignment to the non-redundant protein database (National Center for Biotechnology Information/GenBank) and the Aedes aegypti and Culex quinquefasciatus gene annotations (Vectorbase). This was done with a 1e-05 expectation value. Top hits are shown including accession numbers and description, if available. Unigene number and corresponding GenBank accession numbers are provided for all C. sonorensis genes. Both tables are modified from supplementary information tables at http://dx.doi.org/10.1371/journal.pone.0098123.s003 and numbered accordingly.

Data and Resources

Field Value
accessLevel public
bureauCode {005:18}
catalog_@context https://project-open-data.cio.gov/v1.1/schema/catalog.jsonld
catalog_conformsTo https://project-open-data.cio.gov/v1.1/schema
catalog_describedBy https://project-open-data.cio.gov/v1.1/schema/catalog.json
describedBy https://data.nal.usda.gov/dataset/annotated-reference-transcriptome-female-culicoides-sonorensis-biting-midges/resource
identifier 0e063bb5-f446-4809-89b3-e8747a97a61b
license https://creativecommons.org/publicdomain/zero/1.0/
modified 2019-08-05
programCode {005:040}
publisher Agricultural Research Service
resource-type Dataset
source_datajson_identifier true
source_hash 52014e9562867262be4c2d6b7676f58e2f2c5973
source_schema_version 1.1
Groups
  • AmeriGEOSS
  • National Provider
  • North America
Tags
  • amerigeo
  • amerigeoss
  • anautogeny
  • biting-midge
  • bluetongue
  • ckan
  • culicoides-sonorensis
  • de-novo-transcriptome
  • ehdv
  • epizootic-hemorrhagic-disease-virus
  • flies
  • geo
  • geoss
  • hematophagy
  • insects
  • national
  • north-america
  • np104
  • rnaseq
  • united-states
  • vector
  • vitellogenesis
isopen True
license_id cc-zero
license_title Creative Commons CCZero
license_url http://www.opendefinition.org/licenses/cc-zero
maintainer Saski, Christopher A.
maintainer_email saski@clemson.edu
metadata_created 2025-11-20T02:12:51.764384
metadata_modified 2025-11-20T02:12:51.764388
notes <p>Unigene sequences were annotated by BlastX alignment to the non-redundant protein database (National Center for Biotechnology Information/GenBank) and the Aedes aegypti and Culex quinquefasciatus gene annotations (Vectorbase). This was done with a 1e-05 expectation value. Top hits are shown including accession numbers and description, if available. Unigene number and corresponding GenBank accession numbers are provided for all C. sonorensis genes. Both tables are modified from supplementary information tables at <a href="http://dx.doi.org/10.1371/journal.pone.0098123.s003">http://dx.doi.org/10.1371/journal.pone.0098123.s003</a> and numbered accordingly.</p>
num_resources 3
num_tags 22
title Annotated reference transcriptome for female Culicoides sonorensis biting midges