CottonGen Breeding Information Management System (BIMS)

BIMS, the Breeding Information Management System, is a secure and comprehensive online breeding management system developed for the generic Tripal Database Platform which allows breeders to store, manage, archive and analyze their private breeding program. Breeders can load data in templates provided as well as output from the Field Book App, an android app for collecting phenotype data. In addition to the private breeders BIMS, users without accounts can also view the publicly available breeding data. The fully developed version will allow users to:

Fully integrate their data with publicly available genomic, genetic and breeding data in the community database. Utilize their integrated pedigree, phenotype and genotype data in performing genomic analysis and making breeding decisions. Use open-source new genomics tool and breeding decision tools with seamless access to HPC.

Data and Resources

Field Value
accessLevel public
bureauCode {005:18}
catalog_@context https://project-open-data.cio.gov/v1.1/schema/catalog.jsonld
catalog_conformsTo https://project-open-data.cio.gov/v1.1/schema
catalog_describedBy https://project-open-data.cio.gov/v1.1/schema/catalog.json
datagov_dedupe_retained 20220519114457
identifier 6d0c07fd-7e37-45cd-901a-e1b0c36044de
license https://creativecommons.org/publicdomain/zero/1.0/
modified 2019-08-23
programCode {005:040}
publisher Agricultural Research Service
resource-type Dataset
source_datajson_identifier true
source_hash 5892e47d7cbfe6628393b4b4468f2e4dac959687
source_schema_version 1.1
Groups
  • AmeriGEOSS
  • National Provider
  • North America
Tags
  • amerigeo
  • amerigeoss
  • ckan
  • cmap
  • cotton-marker-database
  • cottondb
  • cottongen
  • gbrowse
  • geo
  • geoss
  • national
  • ncbi-blast
  • north-america
  • np301
  • tripal-database
  • united-states
isopen True
license_id cc-zero
license_title Creative Commons CCZero
license_url http://www.opendefinition.org/licenses/cc-zero
maintainer Main, Dorrie
maintainer_email dorrie@wsu.edu
metadata_created 2025-11-19T22:05:22.433449
metadata_modified 2025-11-19T22:05:22.433454
notes <p>BIMS, the Breeding Information Management System, is a secure and comprehensive online breeding management system developed for the generic Tripal Database Platform which allows breeders to store, manage, archive and analyze their private breeding program. Breeders can load data in templates provided as well as output from the Field Book App, an android app for collecting phenotype data. In addition to the private breeders BIMS, users without accounts can also view the publicly available breeding data. The fully developed version will allow users to:</p> <ul> <li>Fully integrate their data with publicly available genomic, genetic and breeding data in the community database.</li> <li>Utilize their integrated pedigree, phenotype and genotype data in performing genomic analysis and making breeding decisions.</li> <li>Use open-source new genomics tool and breeding decision tools with seamless access to HPC.</li> </ul>
num_resources 1
num_tags 16
title CottonGen Breeding Information Management System (BIMS)