DNA sequences from Ichthyophonid parasites

Data included are DNA sequences used to identify species boundaries among Ichthyophonus-like parasites. Sequences were generated for three gene regions from each parasite isolate. DNA sequences can be downloaded from GenBank (https://www.ncbi.nlm.nih.gov/) as text or fasta files. Accession numbers for each sequence are included in the data table (.csv file). Data includes 87 sequences (99,383 total nucleotides). Once manuscript is accepted there are no restrictions on dissemination of these data.

Data and Resources

Field Value
accessLevel public
bureauCode {010:12}
catalog_@context https://project-open-data.cio.gov/v1.1/schema/catalog.jsonld
catalog_@id https://ddi.doi.gov/usgs-data.json
catalog_conformsTo https://project-open-data.cio.gov/v1.1/schema
catalog_describedBy https://project-open-data.cio.gov/v1.1/schema/catalog.json
identifier http://datainventory.doi.gov/id/dataset/usgs-61855bd8d34ec04fc9c18a84
metadata_type geospatial
modified 2022-04-06T00:00:00Z
old-spatial -171.2109, 28.9216, 36.5625, 68.3992
publisher U.S. Geological Survey
resource-type Dataset
source_datajson_identifier true
source_hash 1baa4713ea36bab23d24bcef78aaf225a47c449d0a8674ec2c4426ce77020be2
source_schema_version 1.1
spatial {"type": "Polygon", "coordinates": [[[-171.2109, 28.9216], [-171.2109, 68.3992], [ 36.5625, 68.3992], [ 36.5625, 28.9216], [-171.2109, 28.9216]]]}
theme {geospatial}
Groups
  • AmeriGEOSS
  • National Provider
  • North America
Tags
  • AmeriGEO
  • AmeriGEOSS
  • CKAN
  • GEO
  • GEOSS
  • National
  • North America
  • United States
  • bering-sea
  • dna-sequencing
  • farming
  • north-atlantic
  • northeast-pacific
  • ocean
  • parasites
  • puget-sound
  • usgs-61855bd8d34ec04fc9c18a84
  • usgs-ema-low-fish-and-wildlife-disease
  • wildlife-disease
  • yukon
isopen False
license_id notspecified
license_title License not specified
maintainer Jacob Gregg
maintainer_email jgregg@usgs.gov
metadata_created 2025-09-24T22:22:57.168841
metadata_modified 2025-09-24T22:22:57.168850
notes Data included are DNA sequences used to identify species boundaries among Ichthyophonus-like parasites. Sequences were generated for three gene regions from each parasite isolate. DNA sequences can be downloaded from GenBank (https://www.ncbi.nlm.nih.gov/) as text or fasta files. Accession numbers for each sequence are included in the data table (.csv file). Data includes 87 sequences (99,383 total nucleotides). Once manuscript is accepted there are no restrictions on dissemination of these data.
num_resources 2
num_tags 20
title DNA sequences from Ichthyophonid parasites