Genome Sequence Data Set01

The fasta files (Genome_Set01.zip) contain the reference-assisted de novo assemblies (as contigs) of three Escherichia coli isolates. The table contains rows as isolates (yellow) and columns as attributes (green) for each individual genome.

This dataset is associated with the following publication: Gomez-Alvarez, V., and J. Hoelle-Schwalbach. Draft Genome Sequences of Antibiotic-Resistant Escherichia coli Isolates from U.S. Wastewater Treatment Plants. Microbiology Resource Announcements. American Society for Microbiology, Washington, DC, USA, 8(23): e00351-19, (2019).

Data and Resources

Field Value
accessLevel public
bureauCode {020:00}
catalog_conformsTo https://project-open-data.cio.gov/v1.1/schema
identifier https://doi.org/10.23719/1503434
license https://pasteur.epa.gov/license/sciencehub-license.html
modified 2019-03-04
programCode {020:096}
publisher U.S. EPA Office of Research and Development (ORD)
publisher_hierarchy U.S. Government > U.S. Environmental Protection Agency > U.S. EPA Office of Research and Development (ORD)
references {https://doi.org/10.1128/mra.00351-19}
resource-type Dataset
source_datajson_identifier true
source_hash 08283c7d5fcf43f70115a61b6e2d14aeeffa5df1
source_schema_version 1.1
Groups
  • AmeriGEOSS
  • National Provider
  • North America
Tags
  • AmeriGEO
  • AmeriGEOSS
  • CKAN
  • GEO
  • GEOSS
  • National
  • North America
  • United States
  • assembly
  • carbapenem-resistant-e-coli
  • carbapenemase-and-extended-spectrum-beta-lactamase-genes
  • draft-genome
  • isolates
  • phylotyping
  • wastewater-treatment
isopen False
license_id other-license-specified
license_title other-license-specified
maintainer Jill Hoelle-Schwalbach
maintainer_email hoelle.jill@epa.gov
metadata_created 2025-09-23T18:03:29.954508
metadata_modified 2025-09-23T18:03:29.954513
notes The fasta files (Genome_Set01.zip) contain the reference-assisted de novo assemblies (as contigs) of three Escherichia coli isolates. The table contains rows as isolates (yellow) and columns as attributes (green) for each individual genome. This dataset is associated with the following publication: Gomez-Alvarez, V., and J. Hoelle-Schwalbach. Draft Genome Sequences of Antibiotic-Resistant Escherichia coli Isolates from U.S. Wastewater Treatment Plants. Microbiology Resource Announcements. American Society for Microbiology, Washington, DC, USA, 8(23): e00351-19, (2019).
num_resources 3
num_tags 15
title Genome Sequence Data Set01