Lung Transcriptome of Newcastle Disease Virus Infected Chickens--Different Immune Response in Two Types of Chicken

Males and females from resistant Fayoumi and susceptible Leghorn chicken lines were either challenged with a lentogenic strain of Newcastle Disease virus or given a mock infection at 3 weeks of age. The lung transcriptomes generated by RNA-sequencing were studied using contrasts across the challenged and non-challenged birds, the two lines, and three time points (2,6, and 10 days post-infection) using Weighted Gene Co-expression Network Analysis (WGNCA). The data can be retrieved by navigating to https://www.ebi.ac.uk/arrayexpress/experiments/E-MTAB-5859/.

Data and Resources

Field Value
accessLevel public
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identifier https://data.usaid.gov/api/views/h4bj-peyb
issued 2018-11-19
landingPage https://www.ebi.ac.uk/arrayexpress/experiments/E-MTAB-5859/
language {en}
license http://creativecommons.org/licenses/by-nd/4.0/legalcode
modified 2017-09-29
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Groups
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  • National Provider
  • North America
Tags
  • amerigeo
  • amerigeoss
  • chicken
  • ckan
  • genetics
  • geo
  • geoss
  • national
  • newcastle-disease-virus
  • north-america
  • poultry
  • rna
  • transcriptome
  • united-states
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maintainer Anna Brenes
maintainer_email no-reply@data.usaid.gov
metadata_created 2025-11-22T02:00:24.084987
metadata_modified 2025-11-22T02:00:24.084992
notes Males and females from resistant Fayoumi and susceptible Leghorn chicken lines were either challenged with a lentogenic strain of Newcastle Disease virus or given a mock infection at 3 weeks of age. The lung transcriptomes generated by RNA-sequencing were studied using contrasts across the challenged and non-challenged birds, the two lines, and three time points (2,6, and 10 days post-infection) using Weighted Gene Co-expression Network Analysis (WGNCA). The data can be retrieved by navigating to https://www.ebi.ac.uk/arrayexpress/experiments/E-MTAB-5859/.
num_resources 1
num_tags 14
title Lung Transcriptome of Newcastle Disease Virus Infected Chickens--Different Immune Response in Two Types of Chicken