Microbial and environmental dataset from Crocker Reef, Florida Keys, 2014-2015

Crocker Reef was the site of an integrated reefscape characterization effort focused on calcification and related biogeochemical processes as part of the USGS Coral Reef Ecosystem Study (CREST) project. This effort included two intensive seasonal sampling trips to capture summer (July 8 to 17, 2014) and winter (January 29 to February 5, 2015) conditions. This data release represents water column microbial and environmental data collected for use as metadata in future publications examining reef metabolic processes via metagenomes derived from water samples and fine-scale temporal and spatial carbonate chemistry measurements. Microbial data are total bacterial counts per milliliter seawater, total viral counts per milliliter of seawater, and plate counts using Thiosulfate Citrate Bile Salts Sucrose (TCBS) agar of Vibrio (bacteria) per milliliter of seawater. Environmental data are water temperature, salinity, dissolved oxygen, and pH.

Data and Resources

Field Value
accessLevel public
bureauCode {010:12}
catalog_@context https://project-open-data.cio.gov/v1.1/schema/catalog.jsonld
catalog_conformsTo https://project-open-data.cio.gov/v1.1/schema
catalog_describedBy https://project-open-data.cio.gov/v1.1/schema/catalog.json
datagov_dedupe_retained 20220725164314
identifier USGS:d1a20b21-971d-4b80-8625-d93fee33372f
metadata_type geospatial
modified 20201013
old-spatial {"type": "Polygon", "coordinates": [[[-80.52775, 24.90897], [-80.52775, 24.91083], [ -80.52644, 24.91083], [ -80.52644, 24.90897], [-80.52775, 24.90897]]]}
publisher U.S. Geological Survey
publisher_hierarchy Department of the Interior > U.S. Geological Survey
resource-type Dataset
source_datajson_identifier true
source_hash 78b69222faf737389595d79fc7b65c57cb7b91ee
source_schema_version 1.1
spatial {"type": "Polygon", "coordinates": [[[-80.52775, 24.90897], [-80.52775, 24.91083], [ -80.52644, 24.91083], [ -80.52644, 24.90897], [-80.52775, 24.90897]]]}
theme {geospatial}
Groups
  • AmeriGEOSS
  • National Provider
  • North America
Tags
  • amerigeo
  • amerigeoss
  • bacteria
  • biota
  • ckan
  • coral-reef
  • crocker-reef
  • environment
  • florida
  • florida-keys
  • geo
  • geoscientificinformation
  • geoss
  • islamorada
  • microbiology
  • national
  • north-america
  • oceans
  • oxygen-content-water
  • reef-ecosystems
  • salinity
  • united-states
  • united-states-of-america
  • usgs-d1a20b21-971d-4b80-8625-d93fee33372f
  • vibrio
  • viruses
  • water-ph
  • water-quality
  • water-temperature
isopen False
license_id notspecified
license_title License not specified
maintainer Christina Kellogg
maintainer_email ckellogg@usgs.gov
metadata_created 2025-11-20T05:16:54.117051
metadata_modified 2025-11-20T05:16:54.117055
notes Crocker Reef was the site of an integrated reefscape characterization effort focused on calcification and related biogeochemical processes as part of the USGS Coral Reef Ecosystem Study (CREST) project. This effort included two intensive seasonal sampling trips to capture summer (July 8 to 17, 2014) and winter (January 29 to February 5, 2015) conditions. This data release represents water column microbial and environmental data collected for use as metadata in future publications examining reef metabolic processes via metagenomes derived from water samples and fine-scale temporal and spatial carbonate chemistry measurements. Microbial data are total bacterial counts per milliliter seawater, total viral counts per milliliter of seawater, and plate counts using Thiosulfate Citrate Bile Salts Sucrose (TCBS) agar of Vibrio (bacteria) per milliliter of seawater. Environmental data are water temperature, salinity, dissolved oxygen, and pH.
num_resources 2
num_tags 29
title Microbial and environmental dataset from Crocker Reef, Florida Keys, 2014-2015