Penstemon grahamii genetic data from a dryland region of the western United States

These data were compiled to investigate the evolutionary history of Graham's beardtongue (Penstemon grahamii). Objective(s) of our study were to determine the evolutionary history of P. grahamii, including ancestral population sizes, the history of population divergences, and historical connectivity. In addition, we characterized population structure, genetic diversity summary statistics, and landscape factors influencing differentiation. These data represent anonymous loci sequenced from throughout the P. grahamii genome (specifically, .vcf and .structure files). Data in these files were manipulated to represent site frequency spectra between population pairs (.data files). These data were collected in 2019 from across the P. grahamii distribution, which is located in northeastern Utah and western Colorado. Specifically, plants are located at lower elevations on the northern slope of the Book Cliffs, which forms the southern side of the Uinta Basin. These data were collected by employees of the U.S. Geological Survey. Known occurrences of P. grahamii were visited and leaf samples from individual plants were collected from across the species’ distribution. These data can be used to further investigate the genetic differentiation, genetic diversity, and evolutionary history of P. grahamii.

Data and Resources

Field Value
accessLevel public
bureauCode {010:12}
catalog_@context https://project-open-data.cio.gov/v1.1/schema/catalog.jsonld
catalog_conformsTo https://project-open-data.cio.gov/v1.1/schema
catalog_describedBy https://project-open-data.cio.gov/v1.1/schema/catalog.json
identifier USGS:608b1e84d34ef6cfc4ac2d32
metadata_type geospatial
modified 20210824
old-spatial -110.33, 39.57, -108.73, 40.25
publisher U.S. Geological Survey
publisher_hierarchy Department of the Interior > U.S. Geological Survey
resource-type Dataset
source_datajson_identifier true
source_hash 0a4c993f712994698cc36ab29b4b08001200d8ce
source_schema_version 1.1
spatial {"type": "Polygon", "coordinates": [[[-110.33, 39.57], [-110.33, 40.25], [ -108.73, 40.25], [ -108.73, 39.57], [-110.33, 39.57]]]}
theme {geospatial}
Groups
  • AmeriGEOSS
  • National Provider
  • North America
Tags
  • adaptation
  • amerigeo
  • amerigeoss
  • biogeography
  • biota
  • ckan
  • colorado
  • demographics
  • demography
  • ecosystem-management
  • ecosystem-restoration
  • environmental-gradients
  • evolution
  • genetic-diversity
  • geo
  • geoss
  • national
  • native-plant-materials-development
  • native-species
  • north-america
  • penstemon-grahamii
  • phylogeny
  • phylogeography
  • population-structure
  • restoration
  • seed-transfer-guidelines
  • united-states
  • usgs-608b1e84d34ef6cfc4ac2d32
  • utah
isopen False
license_id notspecified
license_title License not specified
maintainer Robert T Massatti
maintainer_email rmassatti@usgs.gov
metadata_created 2025-11-22T09:33:31.682415
metadata_modified 2025-11-22T09:33:31.682419
notes These data were compiled to investigate the evolutionary history of Graham's beardtongue (Penstemon grahamii). Objective(s) of our study were to determine the evolutionary history of P. grahamii, including ancestral population sizes, the history of population divergences, and historical connectivity. In addition, we characterized population structure, genetic diversity summary statistics, and landscape factors influencing differentiation. These data represent anonymous loci sequenced from throughout the P. grahamii genome (specifically, .vcf and .structure files). Data in these files were manipulated to represent site frequency spectra between population pairs (.data files). These data were collected in 2019 from across the P. grahamii distribution, which is located in northeastern Utah and western Colorado. Specifically, plants are located at lower elevations on the northern slope of the Book Cliffs, which forms the southern side of the Uinta Basin. These data were collected by employees of the U.S. Geological Survey. Known occurrences of P. grahamii were visited and leaf samples from individual plants were collected from across the species’ distribution. These data can be used to further investigate the genetic differentiation, genetic diversity, and evolutionary history of P. grahamii.
num_resources 2
num_tags 29
title Penstemon grahamii genetic data from a dryland region of the western United States