Hepatic Transcriptome of Japanese quail (Coturnix japonica) Exposed to 17β-Trenbolone

The files in this data release are RNA seq datafiles from a study that examined the effects of the synthetic anabolic steroid 17β hydroxyestra 4,9,11 trien-3-one, trenbolone (17βT - CAS 10161-33-8), a common contaminant of wastes from confined animal feeding operations (CAFOs). Japanese quail (Coturnix japonica) were exposed in the egg and through feed to multiple doses of 17βT and liver transcriptomes were examined to identify genes and pathways directly affected by this androgenic compound. RNA was extracted from liver of adults and embryos and analyzed (1x50 bp) on an Illumina HiSeq 2000. NCBI Biosample accessions and the raw counts that were input into the differential expression analysis are provided in this dataset. The raw sequence data are available at the NCBI Sequence Read Archive under Bioproject numbers PRJNA313918 and PRJNA313931.

Data and Resources

Field Value
accessLevel public
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identifier http://datainventory.doi.gov/id/dataset/usgs-602d430ed34eb120311497a0
metadata_type geospatial
modified 2021-06-30T00:00:00Z
old-spatial -76.874084473212, 38.995678315707, -76.764221191966, 39.07674758543
publisher U.S. Geological Survey
resource-type Dataset
source_datajson_identifier true
source_hash 5b9020886d57ef96aa34c6d1294b25d275ac963029b8781b6949bcf65e36d4f4
source_schema_version 1.1
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theme {geospatial}
Groups
  • AmeriGEOSS
  • National Provider
  • North America
Tags
  • AmeriGEO
  • AmeriGEOSS
  • CKAN
  • GEO
  • GEOSS
  • National
  • North America
  • United States
  • ecotoxicology
  • molecular-biology
  • rna-sequencing
  • usgs-602d430ed34eb120311497a0
isopen False
license_id notspecified
license_title License not specified
maintainer Natalie K Karouna
maintainer_email nkarouna@usgs.gov
metadata_created 2025-09-24T16:02:19.259980
metadata_modified 2025-09-24T16:02:19.259992
notes The files in this data release are RNA seq datafiles from a study that examined the effects of the synthetic anabolic steroid 17β hydroxyestra 4,9,11 trien-3-one, trenbolone (17βT - CAS 10161-33-8), a common contaminant of wastes from confined animal feeding operations (CAFOs). Japanese quail (Coturnix japonica) were exposed in the egg and through feed to multiple doses of 17βT and liver transcriptomes were examined to identify genes and pathways directly affected by this androgenic compound. RNA was extracted from liver of adults and embryos and analyzed (1x50 bp) on an Illumina HiSeq 2000. NCBI Biosample accessions and the raw counts that were input into the differential expression analysis are provided in this dataset. The raw sequence data are available at the NCBI Sequence Read Archive under Bioproject numbers PRJNA313918 and PRJNA313931.
num_resources 2
num_tags 12
title Hepatic Transcriptome of Japanese quail (Coturnix japonica) Exposed to 17β-Trenbolone