‘Viva’ native plant material data in support of restoration and conservation

These data were compiled to investigate the evolutionary history of Hilaria jamesii, Hilaria mutica, and Hilaria rigida. The data release consists of two tab delimited text files that may be used to infer population structure (viva_structure.stru) or relationships among sampling localities (viva.phylip). Files record genetic variation on an individual (.stru) or sampling locality (.phylip) level. These files may be opened and edited in a text editor program, such as Notepad ++ (PC) or BBEdit (Mac). The .phylip file can be uploaded to phyML or SVDQuartets to generate a tree-based visualization of relationships ( http://www.atgc-montpellier.fr/phyml/ or https://paup.phylosolutions.com, repectively). The .stru file can be used in the STRUCTURE program (Falush et al. 2003) to estimate population structure.

Data and Resources

Field Value
accessLevel public
bureauCode {010:12}
catalog_@context https://project-open-data.cio.gov/v1.1/schema/catalog.jsonld
catalog_conformsTo https://project-open-data.cio.gov/v1.1/schema
catalog_describedBy https://project-open-data.cio.gov/v1.1/schema/catalog.json
identifier USGS:5e6f98bfe4b01d50926611d4
metadata_type geospatial
modified 20200827
old-spatial -103.1000, 34.0000, -113.3000, 40.4000
publisher U.S. Geological Survey
publisher_hierarchy Department of the Interior > U.S. Geological Survey
resource-type Dataset
source_datajson_identifier true
source_hash d0f137aaba30aca7d51ec317ade36202cd30be0f
source_schema_version 1.1
spatial {"type": "Polygon", "coordinates": [[[-103.1000, 34.0000], [-103.1000, 40.4000], [ -113.3000, 40.4000], [ -113.3000, 34.0000], [-103.1000, 34.0000]]]}
theme {geospatial}
Groups
  • AmeriGEOSS
  • National Provider
  • North America
Tags
  • adaptation
  • amerigeo
  • amerigeoss
  • arizona
  • biogeography
  • biota
  • california
  • ckan
  • colorado
  • colorado-plateau
  • demographics
  • demography
  • ecosystem-management
  • ecosystem-restoration
  • evolution
  • genetic-diversity
  • genetics
  • geo
  • geoss
  • great-basin
  • hilaria-jamesii
  • hilaria-mutica
  • hilaria-rigida
  • hybridization
  • indigenous-plants
  • intermountain-west
  • kansas
  • mojave-desert
  • national
  • native-plant-materials-development
  • native-species
  • nevada
  • new-mexico
  • north-america
  • phylogeny
  • phylogeography
  • poaceae
  • population-genetics
  • population-structure
  • remediation
  • restoration
  • seed-transfer-guidelines
  • seeds
  • texas
  • united-states
  • usgs-5e6f98bfe4b01d50926611d4
  • utah
  • western-united-states
  • wyoming
isopen False
license_id notspecified
license_title License not specified
maintainer Robert T Massatti
maintainer_email rmassatti@usgs.gov
metadata_created 2025-11-20T14:38:27.492448
metadata_modified 2025-11-20T14:38:27.492452
notes These data were compiled to investigate the evolutionary history of Hilaria jamesii, Hilaria mutica, and Hilaria rigida. The data release consists of two tab delimited text files that may be used to infer population structure (viva_structure.stru) or relationships among sampling localities (viva.phylip). Files record genetic variation on an individual (.stru) or sampling locality (.phylip) level. These files may be opened and edited in a text editor program, such as Notepad ++ (PC) or BBEdit (Mac). The .phylip file can be uploaded to phyML or SVDQuartets to generate a tree-based visualization of relationships ( http://www.atgc-montpellier.fr/phyml/ or https://paup.phylosolutions.com, repectively). The .stru file can be used in the STRUCTURE program (Falush et al. 2003) to estimate population structure.
num_resources 2
num_tags 49
title ‘Viva’ native plant material data in support of restoration and conservation