Data and code files for co-occurrence modeling project

Files included are original data inputs on stream fishes (fish_data_OEPA_2012.csv), water chemistry (OEPA_WATER_2012.csv), geographic data (NHD_Plus_StreamCat); modeling files for generating predictions from the original data, including the R code (MVP_R_Final.txt) and Stan code (MV_Probit_Stan_Final.txt); and the model output file containing predictions for all NHDPlus catchments in the East Fork Little Miami River watershed (MVP_EFLMR_cooc_Final).

This dataset is associated with the following publication: Martin, R., E. Waits, and C. Nietch. Empirically-based modeling and mapping to consider the co-occurrence of ecological receptors and stressors. SCIENCE OF THE TOTAL ENVIRONMENT. Elsevier BV, AMSTERDAM, NETHERLANDS, 613(614): 1228-1239, (2018).

Data e Risorse

Campo Valore
accessLevel public
bureauCode {020:00}
catalog_conformsTo https://project-open-data.cio.gov/v1.1/schema
describedBy https://pasteur.epa.gov/uploads/10.23719/1407576/documents/EFLMR_cooc_data_dictionary_Final.xlsx
describedByType application/vnd.openxmlformats-officedocument.spreadsheetml.sheet
identifier https://doi.org/10.23719/1407576
license https://pasteur.epa.gov/license/sciencehub-license.html
modified 2017-07-13
programCode {020:095}
publisher U.S. EPA Office of Research and Development (ORD)
publisher_hierarchy U.S. Government > U.S. Environmental Protection Agency > U.S. EPA Office of Research and Development (ORD)
references {https://doi.org/10.1016/j.scitotenv.2017.08.301}
resource-type Dataset
source_datajson_identifier true
source_hash 3e2e094a4593f5a52b860c7b2f3f6e0951587a05
source_schema_version 1.1
Gruppi
  • AmeriGEOSS
  • National Provider
  • North America
Tag
  • AmeriGEO
  • AmeriGEOSS
  • CKAN
  • GEO
  • GEOSS
  • National
  • North America
  • United States
  • bayesian-statistics
  • co-occurrence-model
  • co-occurrence-model-predictions
  • co-occurrence-models
  • east-fork-little-miami-river-watershed-data
  • ecological-exposure-assessment
  • ecological-risk-mapping
  • fish-community-bioassessment-data
  • r-code
  • stan-code
  • water-chemistry-bioassessment-data
isopen False
license_id other-license-specified
license_title other-license-specified
maintainer Roy Martin
maintainer_email martin.roy@epa.gov
metadata_created 2025-09-23T14:24:33.886063
metadata_modified 2025-09-23T14:24:33.886068
notes Files included are original data inputs on stream fishes (fish_data_OEPA_2012.csv), water chemistry (OEPA_WATER_2012.csv), geographic data (NHD_Plus_StreamCat); modeling files for generating predictions from the original data, including the R code (MVP_R_Final.txt) and Stan code (MV_Probit_Stan_Final.txt); and the model output file containing predictions for all NHDPlus catchments in the East Fork Little Miami River watershed (MVP_EFLMR_cooc_Final). This dataset is associated with the following publication: Martin, R., E. Waits, and C. Nietch. Empirically-based modeling and mapping to consider the co-occurrence of ecological receptors and stressors. SCIENCE OF THE TOTAL ENVIRONMENT. Elsevier BV, AMSTERDAM, NETHERLANDS, 613(614): 1228-1239, (2018).
num_resources 6
num_tags 19
title Data and code files for co-occurrence modeling project