Nickel proteomics data

The dataset include the following figures and tables: 1)Changes in protein expression of the 14 pathway regulators induced by Ni (II). 2)Hierarchical clustering of 12 differentially expressed or phosphorylated proteins in BEAS-2B cells treated with Ni (II). 3) Relative cell survival (X-axis) vs. protein expression or phosphorylation levels (Y-axis) in BEAS-2B control cells treated with Ni (II) at 4 different concentrations 4)Four representative proteins, PDIA1, ACADM, RUVBL1, PRDX2 identified using 2-DE profiling were either increased or decreased in a concentration responsive manner 5)Networks of proteins showing inter-relationships and pathways which was obtained using IPA 6)Schematic representation of the interplay of the core proteins and cytotoxicity pathways mediated by Ni (II). 7) some supplementary data.

This dataset is associated with the following publication: Ge , Y., M. Bruno , N. Coates , K. Wallace , D. Andrews , A. Swank , W. Winnik , and J. Ross. Proteomic Assessment of Biochemical Pathways That Are Critical to Nickel-Induced Toxicity Responses in Human Epithelial Cells. PLoS ONE. Public Library of Science, San Francisco, CA, USA, 11(9): 1-20, (2016).

Data e Risorse

Campo Valore
accessLevel public
bureauCode {020:00}
catalog_conformsTo https://project-open-data.cio.gov/v1.1/schema
describedBy https://pasteur.epa.gov/uploads/10.23719/1395012/documents/data%20%20for%20figure%201.xlsx
describedByType application/vnd.openxmlformats-officedocument.spreadsheetml.sheet
identifier https://doi.org/10.23719/1395012
license https://pasteur.epa.gov/license/sciencehub-license.html
modified 2017-09-18
programCode {020:000}
publisher U.S. EPA Office of Research and Development (ORD)
publisher_hierarchy U.S. Government > U.S. Environmental Protection Agency > U.S. EPA Office of Research and Development (ORD)
references {https://doi.org/10.1371/journal.pone.0162522}
resource-type Dataset
source_datajson_identifier true
source_hash ba9aa4e19c332b546fe67f41f75a809ff10691d5
source_schema_version 1.1
Gruppi
  • AmeriGEOSS
  • National Provider
  • North America
Tag
  • amerigeo
  • amerigeoss
  • ckan
  • cytotoxicity
  • dose-response
  • elisa
  • geo
  • geoss
  • human-epithelial-cells
  • metals
  • national
  • nickel
  • nickel-proteomic-profile
  • north-america
  • phosphorylation
  • protein-expression
  • proteomics
  • sys-tems-biology
  • united-states
isopen False
license_id other-license-specified
license_title other-license-specified
maintainer Yue Ge
maintainer_email ge.yue@epa.gov
metadata_created 2025-11-22T06:22:40.713444
metadata_modified 2025-11-22T06:22:40.713448
notes The dataset include the following figures and tables: 1)Changes in protein expression of the 14 pathway regulators induced by Ni (II). 2)Hierarchical clustering of 12 differentially expressed or phosphorylated proteins in BEAS-2B cells treated with Ni (II). 3) Relative cell survival (X-axis) vs. protein expression or phosphorylation levels (Y-axis) in BEAS-2B control cells treated with Ni (II) at 4 different concentrations 4)Four representative proteins, PDIA1, ACADM, RUVBL1, PRDX2 identified using 2-DE profiling were either increased or decreased in a concentration responsive manner 5)Networks of proteins showing inter-relationships and pathways which was obtained using IPA 6)Schematic representation of the interplay of the core proteins and cytotoxicity pathways mediated by Ni (II). 7) some supplementary data. This dataset is associated with the following publication: Ge , Y., M. Bruno , N. Coates , K. Wallace , D. Andrews , A. Swank , W. Winnik , and J. Ross. Proteomic Assessment of Biochemical Pathways That Are Critical to Nickel-Induced Toxicity Responses in Human Epithelial Cells. PLoS ONE. Public Library of Science, San Francisco, CA, USA, 11(9): 1-20, (2016).
num_resources 2
num_tags 19
title Nickel proteomics data