A cross-platform approach to characterize and screen potential neurovascular unit toxicants
Data and Resources
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SupplWorkbook.xlsxXLS
SupplWorkbook.xlsx
| Field | Value |
|---|---|
| accessLevel | public |
| bureauCode | {020:00} |
| catalog_conformsTo | https://project-open-data.cio.gov/v1.1/schema |
| identifier | https://doi.org/10.23719/1518764 |
| license | https://pasteur.epa.gov/license/sciencehub-license.html |
| modified | 2019-11-01 |
| programCode | {020:095} |
| publisher | U.S. EPA Office of Research and Development (ORD) |
| publisher_hierarchy | U.S. Government > U.S. Environmental Protection Agency > U.S. EPA Office of Research and Development (ORD) |
| references | {https://doi.org/10.1016/j.reprotox.2020.06.010} |
| resource-type | Dataset |
| source_datajson_identifier | true |
| source_hash | 655a535d91a1c4137aec70a08c1e7d5c4542f8d8 |
| source_schema_version | 1.1 |
| Groups |
|
| Tags |
|
| isopen | False |
| license_id | other-license-specified |
| license_title | other-license-specified |
| maintainer | Thomas Knudsen |
| maintainer_email | knudsen.thomas@epa.gov |
| metadata_created | 2025-09-23T20:56:47.742259 |
| metadata_modified | 2025-09-23T20:56:47.742265 |
| notes | Development of the neurovascular unit (NVU) is a complex, multistage process that requires orchestrated cell signaling mechanisms across several cell types and ultimately results in the formation of the blood-brain barrier. Typical high-throughput screening (HTS) assays investigate single biochemical or single cell responses following chemical insult. As the NVU comprises multiple cell types interacting at various stages of development, a methodology for combining high-throughput results across pertinent cell-based assays is needed to investigate potential chemical-induced disruption to the development of this complex cell system. To this end, we developed a novel method for screening putative NVU disruptors across diverse assay platforms to predict chemical perturbation of the developing NVU. Here, HTS assay results measuring chemical-induced perturbations to cellular key events across angiogenic and neurogenic outcomes were combined to create a cell-based prioritization of NVU hazard. Using activity from each biological outcome, chemicals were grouped into similar modes of action and used to train a logistic regression literature model. This model utilizes the chemical-specific pairwise mutual information score for PubMed MeSH annotations to represent how often a chemical was shown to produce a specific outcome in the published literature space. Taken together, this study presents a methodology to investigate NVU developmental hazard using cell-based HTS assays and literature evidence to prioritize screening of putative NVU disruptors. The results from these screening efforts demonstrate how chemicals that represent a range of putative vascular disrupting compound (pVDC) scores based on angiogenic endpoints can also produce effects on neurogenic outcomes such as neurite outgrowth, neuroprogenitor/neural crest migration, representing an additional method for understanding the range of possible modes of action for disruption of the developing NVU. This dataset is associated with the following publication: Zurlinden, T., K. Saili, N. Baker, T. Toimela, T. Heinonen, and T. Knudsen. A cross-platform approach to characterize and screen potential neurovascular unit toxicants. REPRODUCTIVE TOXICOLOGY. Elsevier Science Ltd, New York, NY, USA, 96(September 2020): 300-315, (2020). |
| num_resources | 1 |
| num_tags | 15 |
| title | A cross-platform approach to characterize and screen potential neurovascular unit toxicants |